BioBricks.ai

Managed Public-Health Data Assets


QuickStart

To install BioBricks and get the HUGO gene nomenclature brick:


> pipx install biobricks
> biobricks configure
> biobricks install hello-brick
    

The asset is now available for import in languages like R and Python. In Python:


>>> import biobricks as bb, pandas as pd
>>> hgnc = bb.assets('hgnc')
>>> pd.read_parquet(hgnc.hgnc_complete_set_parquet).head()

symbol     name                            ...      
A1BG       alpha-1-B glycoprotein          ...
A1BG-AS1   A1BG antisense RNA 1            ...
A1CF       APOBEC1 complementation factor  ...
[5 rows x 54 columns]
    
Find the docs at docs.biobricks.ai. View all assets at biobricks.ai/search